Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | RT97_12215 | Not Available | Positive | 2627597 - 2628796 | 44199.4 |
| hypothetical protein | RT97_12220 | Not Available | Positive | 2628793 - 2628996 | 7571.25 |
| tonb-dependent receptor | RT97_12225 | Not Available | Positive | 2629078 - 2631210 | 77027.4 |
| s-adenosylmethionine synthetase | RT97_12230 | Not Available | Negative | 2631232 - 2632416 | 43116.1 |
| lipid a biosynthesis acyltransferase | RT97_12235 | Not Available | Positive | 2632633 - 2633529 | 32736.0 |
| lipid a biosynthesis acyltransferase | RT97_12240 | Not Available | Positive | 2633526 - 2634410 | 32956.1 |
| alpha/beta hydrolase | RT97_12245 | Not Available | Negative | 2634510 - 2635421 | 33476.1 |
| gtp-binding protein | RT97_12250 | Not Available | Negative | 2635505 - 2636254 | 27123.7 |
| cytochrome c | RT97_12255 | Not Available | Positive | 2636325 - 2636996 | 23284.7 |
| cytochrome c biogenesis protein resb | RT97_12260 | Not Available | Positive | 2637115 - 2639286 | 78572.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
