Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-arabinitol 4-dehydrogenase | RT97_12165 | Not Available | Positive | 2615008 - 2616387 | 49755.2 |
| sorbitol dehydrogenase | RT97_12170 | Not Available | Positive | 2616384 - 2617172 | 27351.9 |
| transaldolase | RT97_12175 | Not Available | Positive | 2617272 - 2617943 | 23757.7 |
| ribokinase | RT97_12180 | Not Available | Positive | 2617963 - 2618910 | 33210.4 |
| arac family transcriptional regulator | RT97_12185 | Not Available | Positive | 2618942 - 2619898 | 36021.7 |
| xylulose kinase | RT97_12190 | Not Available | Positive | 2619921 - 2621390 | 52165.7 |
| molecular chaperone groel | RT97_12195 | Not Available | Negative | 2621555 - 2623210 | 57364.5 |
| molecular chaperone groes | RT97_12200 | Not Available | Negative | 2623240 - 2623530 | 10338.6 |
| phospholipase | RT97_12205 | Not Available | Negative | 2623700 - 2625289 | 58759.6 |
| tonb-dependent receptor | RT97_12210 | Not Available | Positive | 2625461 - 2627563 | 77510.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
