Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazolonepropionase | RT97_01115 | Not Available | Negative | 236971 - 238233 | 44367.2 |
| hutd | RT97_01120 | Not Available | Negative | 238256 - 238828 | 20506.3 |
| abc transporter permease | RT97_01125 | Not Available | Negative | 238980 - 239648 | 24153.5 |
| abc transporter permease | RT97_01130 | Not Available | Negative | 239758 - 240492 | 26837.6 |
| iclr family transcriptional regulator | RT97_01135 | Not Available | Negative | 240537 - 241271 | 25944.2 |
| urocanate hydratase | RT97_01140 | Not Available | Negative | 241388 - 243115 | 62925.9 |
| histidine ammonia-lyase | RT97_01145 | Not Available | Negative | 243143 - 244702 | 53604.9 |
| histidine utilization repressor | RT97_01150 | Not Available | Negative | 244764 - 245501 | 27646.0 |
| sulfonate abc transporter atp-binding protein | RT97_01155 | Not Available | Negative | 245512 - 246306 | 29340.4 |
| abc transporter permease | RT97_01160 | Not Available | Negative | 246291 - 247169 | 31087.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
