Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | RT97_12065 | Not Available | Positive | 2591074 - 2591985 | 32382.3 |
| methionine abc transporter atp-binding protein | RT97_12070 | Not Available | Positive | 2592007 - 2593077 | 38401.7 |
| abc transporter atp-binding protein | RT97_12075 | Not Available | Positive | 2593074 - 2594126 | 38636.9 |
| hypothetical protein | RT97_12080 | Not Available | Positive | 2594123 - 2596075 | 70392.2 |
| dioxygenase | RT97_12085 | Not Available | Positive | 2596302 - 2597075 | 27486.6 |
| glucose-6-phosphate dehydrogenase | RT97_12090 | Not Available | Negative | 2597112 - 2598581 | 54803.3 |
| iron abc transporter substrate-binding protein | RT97_12095 | Not Available | Positive | 2598738 - 2599748 | 36360.6 |
| iron abc transporter permease | RT97_12100 | Not Available | Positive | 2599757 - 2602030 | 80212.5 |
| sugar abc transporter substrate-binding protein | RT97_12105 | Not Available | Positive | 2602027 - 2603067 | 37029.7 |
| haloacid dehalogenase | RT97_12110 | Not Available | Positive | 2603080 - 2603742 | 24446.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
