Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | RT97_11910 | Not Available | Positive | 2556990 - 2558132 | 40330.0 |
| enoyl-coa hydratase | RT97_11915 | Not Available | Positive | 2558129 - 2558941 | 28369.0 |
| coa-transferase | RT97_11920 | Not Available | Positive | 2559090 - 2560298 | 43205.0 |
| abc transporter substrate-binding protein | RT97_11925 | Not Available | Positive | 2560349 - 2561359 | 35552.1 |
| amp-dependent synthetase | RT97_11930 | Not Available | Positive | 2561432 - 2563357 | 67427.0 |
| abc transporter substrate-binding protein | RT97_11935 | Not Available | Positive | 2563405 - 2564403 | 35493.2 |
| electron transporter rnfb | RT97_11940 | Not Available | Positive | 2564432 - 2565181 | 26917.1 |
| electron transfer flavoprotein subunit beta | RT97_11945 | Not Available | Positive | 2565258 - 2566190 | 31297.2 |
| nitronate monooxygenase | RT97_11950 | Not Available | Positive | 2566195 - 2567166 | 34688.9 |
| hypothetical protein | RT97_11955 | Not Available | Positive | 2567640 - 2567909 | 9650.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
