Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin | RT97_11860 | Not Available | Positive | 2546878 - 2547261 | 14184.9 |
| dna polymerase | RT97_11865 | Not Available | Negative | 2547262 - 2548728 | 53791.5 |
| biotin synthase | RT97_11870 | Not Available | Negative | 2548740 - 2550002 | 46391.0 |
| (2fe-2s)-binding protein | RT97_11875 | Not Available | Positive | 2550127 - 2550480 | 12235.4 |
| phosphatidylethanolamine-binding protein | RT97_11880 | Not Available | Positive | 2550504 - 2551061 | 18525.4 |
| hypothetical protein | RT97_11885 | Not Available | Positive | 2551112 - 2551348 | 8345.07 |
| lysr family transcriptional regulator | RT97_11890 | Not Available | Negative | 2551333 - 2552253 | 34305.7 |
| 3-hydroxyacyl-coa dehydrogenase | RT97_11895 | Not Available | Positive | 2552410 - 2554554 | 75905.6 |
| acetyl-coa acetyltransferase | RT97_11900 | Not Available | Positive | 2554569 - 2555759 | 41828.4 |
| acyl-coa dehydrogenase | RT97_11905 | Not Available | Positive | 2555770 - 2556978 | 44172.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
