Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_11760 | Not Available | Positive | 2525343 - 2525915 | 20369.7 |
| multidrug transporter cfla | RT97_11765 | Not Available | Negative | 2525920 - 2527128 | 41290.5 |
| rnd transporter | RT97_11770 | Not Available | Negative | 2527125 - 2528594 | 51040.4 |
| secretion protein hlyd | RT97_11775 | Not Available | Negative | 2528599 - 2529522 | 33037.5 |
| hypothetical protein | RT97_11780 | Not Available | Negative | 2529536 - 2529742 | 7738.78 |
| fusaric acid resistance protein | RT97_11785 | Not Available | Negative | 2529739 - 2531874 | 75697.0 |
| marr family transcriptional regulator | RT97_11790 | Not Available | Negative | 2531875 - 2532360 | 17253.9 |
| transcriptional regulator | RT97_11795 | Not Available | Negative | 2532906 - 2534504 | 56970.1 |
| dihydropteridine reductase | RT97_11800 | Not Available | Positive | 2534640 - 2535824 | 42757.2 |
| hypothetical protein | RT97_11805 | Not Available | Negative | 2535862 - 2536812 | 34428.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
