Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_11640 | Not Available | Negative | 2499685 - 2500053 | 13493.6 |
| esterase | RT97_11650 | Not Available | Negative | 2501304 - 2502173 | 30947.5 |
| hypothetical protein | RT97_11655 | Not Available | Negative | 2503437 - 2504417 | 34306.6 |
| acyl-coa dehydrogenase | RT97_11660 | Not Available | Negative | 2504475 - 2505665 | 42511.3 |
| amp-dependent synthetase | RT97_11665 | Not Available | Negative | 2505731 - 2507302 | 56396.9 |
| hypothetical protein | RT97_11680 | Not Available | Negative | 2510926 - 2511237 | 11660.6 |
| hypothetical protein | RT97_11685 | Not Available | Negative | 2511470 - 2512000 | 19257.9 |
| patatin | RT97_11690 | Not Available | Negative | 2512045 - 2513073 | 37139.2 |
| hypothetical protein | RT97_11695 | Not Available | Negative | 2513222 - 2513437 | 7594.13 |
| hypothetical protein | RT97_11700 | Not Available | Positive | 2513628 - 2514044 | 14059.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
