Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enamidase | RT97_01055 | Not Available | Positive | 222664 - 223863 | 41388.4 |
| polysaccharide synthesis protein gtra | RT97_01060 | Not Available | Negative | 223992 - 224381 | 13756.0 |
| glycosyl transferase family protein | RT97_01065 | Not Available | Negative | 224378 - 225358 | 35227.8 |
| hypothetical protein | RT97_01070 | Not Available | Negative | 225355 - 227157 | 65814.9 |
| lactonizing lipase | RT97_01080 | Not Available | Positive | 230299 - 231231 | 32598.8 |
| membrane protein | RT97_01090 | Not Available | Negative | 232164 - 232601 | 15826.6 |
| lysr family transcriptional regulator | RT97_01095 | Not Available | Positive | 232702 - 233616 | 32671.3 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | RT97_01100 | Not Available | Negative | 233613 - 234671 | 37634.7 |
| n-formylglutamate amidohydrolase | RT97_01105 | Not Available | Negative | 234712 - 235536 | 29998.4 |
| n-formimino-l-glutamate deiminase | RT97_01110 | Not Available | Negative | 235544 - 236974 | 51192.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
