Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma-70 | RT97_11585 | Not Available | Negative | 2486701 - 2487420 | 25903.4 |
| rna polymerase sigma factor | RT97_11590 | Not Available | Negative | 2487438 - 2488007 | 20818.9 |
| hypothetical protein | RT97_11595 | Not Available | Negative | 2488082 - 2488639 | 19141.8 |
| hypothetical protein | RT97_11605 | Not Available | Negative | 2491249 - 2491563 | 10862.8 |
| mfs sugar transporter | RT97_11610 | Not Available | Positive | 2493935 - 2495137 | 41331.8 |
| 2,5-diketo-d-gluconic acid reductase | RT97_11615 | Not Available | Positive | 2495193 - 2496020 | 29555.4 |
| hypothetical protein | RT97_11620 | Not Available | Positive | 2496142 - 2497749 | 58077.8 |
| hypothetical protein | RT97_11625 | Not Available | Negative | 2497792 - 2498169 | 14017.8 |
| hypothetical protein | RT97_11630 | Not Available | Negative | 2498300 - 2498677 | 13453.2 |
| polyisoprenoid-binding protein | RT97_11635 | Not Available | Negative | 2498758 - 2499336 | 20608.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
