Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine cyclodeaminase | RT97_11385 | Not Available | Negative | 2446555 - 2447541 | 34936.7 |
| hypothetical protein | RT97_11390 | Not Available | Negative | 2447599 - 2447907 | 10865.5 |
| preprotein translocase subunit seca | RT97_11395 | Not Available | Positive | 2448090 - 2450876 | 104521.0 |
| ornithine acetyltransferase | RT97_11400 | Not Available | Positive | 2450906 - 2452135 | 43057.6 |
| atpase aaa | RT97_11405 | Not Available | Positive | 2452218 - 2453093 | 32522.6 |
| 7,8-dihydro-8-oxoguanine-triphosphatase | RT97_11410 | Not Available | Positive | 2453090 - 2453548 | 16700.1 |
| acyltransferase | RT97_11415 | Not Available | Positive | 2453604 - 2455550 | 71108.6 |
| hypothetical protein | RT97_11420 | Not Available | Negative | 2455564 - 2455776 | 7619.91 |
| cell division protein zapd | RT97_11425 | Not Available | Negative | 2455773 - 2456528 | 28516.3 |
| hypothetical protein | RT97_11430 | Not Available | Negative | 2456565 - 2457584 | 38847.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
