Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | RT97_11225 | Not Available | Positive | 2413969 - 2415300 | 46693.3 |
| amidohydrolase | RT97_11230 | Not Available | Positive | 2415329 - 2416540 | 42582.3 |
| exonuclease | RT97_11235 | Not Available | Negative | 2416551 - 2417407 | 30473.1 |
| membrane protein | RT97_11240 | Not Available | Negative | 2417408 - 2417728 | 11443.2 |
| hypothetical protein | RT97_11245 | Not Available | Negative | 2417883 - 2418212 | 11319.5 |
| transcriptional regulator | RT97_11255 | Not Available | Negative | 2420594 - 2421304 | 26171.5 |
| histidine kinase | RT97_11260 | Not Available | Negative | 2421295 - 2422890 | 58148.1 |
| hypothetical protein | RT97_11265 | Not Available | Positive | 2423055 - 2423330 | 9952.95 |
| transcriptional regulator | RT97_11275 | Not Available | Negative | 2423611 - 2424294 | 24955.0 |
| membrane protein | RT97_11280 | Not Available | Negative | 2424311 - 2426713 | 87592.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
