Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | RT97_11175 | Not Available | Negative | 2404905 - 2405888 | 34449.7 |
| betaine-aldehyde dehydrogenase | RT97_11180 | Not Available | Negative | 2405885 - 2407351 | 52349.6 |
| abc transporter substrate-binding protein | RT97_11185 | Not Available | Negative | 2407366 - 2408346 | 34222.5 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | RT97_11190 | Not Available | Negative | 2408393 - 2409163 | 28476.9 |
| fumarylacetoacetate hydrolase | RT97_11195 | Not Available | Negative | 2409160 - 2409795 | 22372.0 |
| marr family transcriptional regulator | RT97_11200 | Not Available | Negative | 2409792 - 2410226 | 16258.8 |
| dna repair protein rada | RT97_11205 | Not Available | Positive | 2410326 - 2411714 | 48642.9 |
| hypothetical protein | RT97_11210 | Not Available | Negative | 2411768 - 2412223 | 15222.0 |
| glycerate kinase | RT97_11215 | Not Available | Positive | 2412418 - 2412852 | 15815.5 |
| lysr family transcriptional regulator | RT97_11220 | Not Available | Negative | 2412857 - 2413801 | 34812.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
