Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | RT97_01005 | Not Available | Negative | 212129 - 212863 | 26994.9 |
| abc transporter | RT97_01010 | Not Available | Negative | 212860 - 213654 | 28723.2 |
| abc transporter permease | RT97_01015 | Not Available | Negative | 213651 - 215582 | 68863.1 |
| abc transporter substrate-binding protein | RT97_01020 | Not Available | Negative | 215663 - 216868 | 43711.3 |
| peptide synthetase | RT97_01025 | Not Available | Negative | 216925 - 217509 | 20342.6 |
| hypothetical protein | RT97_01030 | Not Available | Negative | 217549 - 218190 | 22726.5 |
| thiamine biosynthesis protein apbe | RT97_01035 | Not Available | Negative | 218211 - 219113 | 31774.0 |
| 6-hydroxynicotinate reductase | RT97_01040 | Not Available | Negative | 219117 - 220742 | 57548.9 |
| ferredoxin-nadp reductase | RT97_01045 | Not Available | Positive | 221059 - 221832 | 29266.2 |
| tetr family transcriptional regulator | RT97_01050 | Not Available | Positive | 221960 - 222709 | 28097.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
