Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter atp-binding protein | RT97_11025 | Not Available | Negative | 2376011 - 2376988 | 35330.7 |
| peptide abc transporter atp-binding protein | RT97_11030 | Not Available | Negative | 2377146 - 2378183 | 37252.6 |
| peptide abc transporter permease | RT97_11035 | Not Available | Negative | 2378183 - 2379022 | 30228.3 |
| peptide abc transporter | RT97_11040 | Not Available | Negative | 2379026 - 2379979 | 33618.1 |
| cycloisomerase | RT97_11045 | Not Available | Negative | 2379988 - 2381244 | 43778.5 |
| peptide abc transporter | RT97_11050 | Not Available | Negative | 2381265 - 2382848 | 57668.4 |
| hypothetical protein | RT97_11055 | Not Available | Positive | 2383041 - 2383427 | 13931.7 |
| clp protease | RT97_11060 | Not Available | Negative | 2383443 - 2384033 | 21456.5 |
| rna polymerase subunit sigma-24 | RT97_11065 | Not Available | Positive | 2384121 - 2384885 | 27960.7 |
| ammonia channel protein | RT97_11070 | Not Available | Positive | 2385109 - 2386407 | 45025.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
