Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | RT97_10965 | Not Available | Negative | 2362096 - 2363145 | 36995.0 |
| branched-chain amino acid abc transporter permease | RT97_10970 | Not Available | Negative | 2363145 - 2364029 | 31184.4 |
| abc transporter | RT97_10980 | Not Available | Negative | 2366008 - 2366766 | 27839.0 |
| flavin reductase | RT97_10985 | Not Available | Negative | 2367303 - 2367932 | 22385.6 |
| aminotransferase | RT97_10995 | Not Available | Negative | 2368998 - 2370287 | 46961.6 |
| abc transporter substrate-binding protein | RT97_11000 | Not Available | Negative | 2370292 - 2371188 | 31944.4 |
| lysr family transcriptional regulator | RT97_11005 | Not Available | Positive | 2371331 - 2372251 | 33824.2 |
| d-aminoacylase | RT97_11010 | Not Available | Negative | 2372286 - 2373764 | 53123.8 |
| rpir family transcriptional regulator | RT97_11015 | Not Available | Negative | 2373761 - 2374678 | 32323.8 |
| amino acid deaminase | RT97_11020 | Not Available | Negative | 2374692 - 2376014 | 47692.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
