Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | RT97_10845 | Not Available | Negative | 2336764 - 2337339 | 20584.4 |
| arac family transcriptional regulator | RT97_10850 | Not Available | Positive | 2337480 - 2338283 | 27325.8 |
| tetr family transcriptional regulator | RT97_10855 | Not Available | Negative | 2338265 - 2338915 | 23882.4 |
| phenylacetic acid degradation protein paay | RT97_10860 | Not Available | Negative | 2338978 - 2339580 | 21335.9 |
| enoyl-coa hydratase | RT97_10865 | Not Available | Positive | 2339729 - 2340532 | 27451.1 |
| phenylacetic acid degradation protein | RT97_10870 | Not Available | Positive | 2340536 - 2340991 | 16356.3 |
| phenylacetate--coa ligase | RT97_10875 | Not Available | Positive | 2341029 - 2342339 | 48100.5 |
| phenylacetate-coa oxygenase | RT97_10880 | Not Available | Positive | 2342373 - 2343380 | 38092.1 |
| phenylacetate-coa oxygenase | RT97_10885 | Not Available | Positive | 2343377 - 2343676 | 11441.5 |
| phenylacetic acid degradation protein | RT97_10890 | Not Available | Positive | 2343785 - 2344564 | 28750.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
