Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_10790 | Not Available | Positive | 2326464 - 2327531 | 39161.0 |
| metalloenzyme domain-containing protein | RT97_10795 | Not Available | Positive | 2327528 - 2328334 | 29520.8 |
| coproporphyrinogen iii oxidase | RT97_10800 | Not Available | Positive | 2328355 - 2329686 | 49057.6 |
| radical sam protein | RT97_10805 | Not Available | Positive | 2329680 - 2330528 | 31920.1 |
| hypothetical protein | RT97_10815 | Not Available | Negative | 2331116 - 2331574 | 15434.1 |
| dnaase | RT97_10820 | Not Available | Negative | 2331705 - 2332565 | 31100.3 |
| peptidase s1 and s6 chymotrypsin/hap | RT97_10825 | Not Available | Positive | 2332654 - 2333664 | 34402.3 |
| atpase | RT97_10830 | Not Available | Positive | 2333718 - 2334752 | 37732.9 |
| atpase | RT97_10835 | Not Available | Positive | 2334733 - 2335728 | 37050.4 |
| abc transporter atp-binding protein | RT97_10840 | Not Available | Positive | 2335725 - 2336762 | 37268.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
