Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_10685 | Not Available | Positive | 2301596 - 2304328 | 99984.6 |
| hypothetical protein | RT97_10690 | Not Available | Positive | 2304325 - 2305056 | 27014.4 |
| hypothetical protein | RT97_10695 | Not Available | Positive | 2305203 - 2306138 | 35361.4 |
| hypothetical protein | RT97_10700 | Not Available | Positive | 2306292 - 2307796 | 54731.1 |
| bile acid:sodium symporter | RT97_10705 | Not Available | Negative | 2307951 - 2308949 | 35603.1 |
| chemotaxis protein chey | RT97_10710 | Not Available | Negative | 2309129 - 2309530 | 15201.0 |
| quinone oxidoreductase | RT97_10715 | Not Available | Negative | 2309656 - 2310639 | 34462.8 |
| hypothetical protein | RT97_10720 | Not Available | Negative | 2310698 - 2311786 | 40117.9 |
| membrane protein | RT97_10725 | Not Available | Positive | 2311853 - 2312755 | 32627.8 |
| 3-oxoacyl-acp reductase | RT97_10735 | Not Available | Negative | 2314548 - 2315342 | 27048.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
