Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_10635 | Not Available | Positive | 2287943 - 2288602 | 22133.8 |
| type vi secretion protein | RT97_10640 | Not Available | Positive | 2288723 - 2289238 | 19077.8 |
| evpb family type vi secretion protein | RT97_10645 | Not Available | Positive | 2289241 - 2290731 | 54760.9 |
| hypothetical protein | RT97_10650 | Not Available | Positive | 2290817 - 2291329 | 18850.1 |
| type vi secretion protein | RT97_10655 | Not Available | Positive | 2291438 - 2291932 | 18377.0 |
| type vi secretion protein | RT97_10660 | Not Available | Positive | 2291939 - 2293789 | 68175.8 |
| type vi secretion protein | RT97_10665 | Not Available | Positive | 2293753 - 2294871 | 42310.8 |
| atpase aaa | RT97_10670 | Not Available | Positive | 2294933 - 2297665 | 98355.2 |
| hypothetical protein | RT97_10675 | Not Available | Positive | 2297740 - 2300589 | 101106.0 |
| hypothetical protein | RT97_10680 | Not Available | Positive | 2300681 - 2301547 | 31996.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
