Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent oxidoreductase | RT97_10525 | Not Available | Positive | 2260156 - 2261199 | 37028.0 |
| hypothetical protein | RT97_10530 | Not Available | Negative | 2261206 - 2261529 | 11410.6 |
| permease | RT97_10535 | Not Available | Negative | 2261612 - 2262463 | 29624.2 |
| arac family transcriptional regulator | RT97_10540 | Not Available | Negative | 2262531 - 2263235 | 25491.5 |
| citrate transporter | RT97_10545 | Not Available | Negative | 2263262 - 2264392 | 40156.5 |
| 4-coumarate--coa ligase | RT97_10550 | Not Available | Negative | 2264373 - 2265905 | 54876.4 |
| hypothetical protein | RT97_10555 | Not Available | Positive | 2266104 - 2266592 | 16459.7 |
| hypothetical protein | RT97_10570 | Not Available | Negative | 2270376 - 2270867 | 18117.9 |
| hypothetical protein | RT97_10575 | Not Available | Negative | 2271251 - 2274253 | 106178.0 |
| hypothetical protein | RT97_10580 | Not Available | Negative | 2274278 - 2275081 | 26544.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
