Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_10475 | Not Available | Positive | 2252313 - 2252852 | 18762.4 |
| pts fructose transporter subunit iia | RT97_10480 | Not Available | Positive | 2253019 - 2253474 | 16288.8 |
| phosphocarrier protein hpr | RT97_10485 | Not Available | Positive | 2253443 - 2253712 | 9627.74 |
| phosphoenolpyruvate-protein phosphotransferase | RT97_10490 | Not Available | Positive | 2253860 - 2255659 | 65629.2 |
| hypothetical protein | RT97_10495 | Not Available | Positive | 2255905 - 2256279 | 12653.8 |
| hypothetical protein | RT97_10500 | Not Available | Positive | 2256401 - 2256865 | 16650.8 |
| hypothetical protein | RT97_10505 | Not Available | Positive | 2256858 - 2257352 | 17317.2 |
| hypothetical protein | RT97_10510 | Not Available | Positive | 2257346 - 2257735 | 13540.1 |
| cpxr | RT97_10515 | Not Available | Positive | 2257786 - 2258493 | 26137.7 |
| histidine kinase | RT97_10520 | Not Available | Positive | 2258490 - 2259884 | 52098.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
