Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | RT97_10375 | Not Available | Negative | 2238752 - 2239921 | 42440.1 |
| acetyl-coa acetyltransferase | RT97_10380 | Not Available | Negative | 2239918 - 2241141 | 43408.1 |
| 30s ribosomal protein s10 | RT97_10385 | Not Available | Positive | 2241307 - 2241621 | 11834.6 |
| hypothetical protein | RT97_10390 | Not Available | Positive | 2241771 - 2243357 | 54321.9 |
| hypothetical protein | RT97_10395 | Not Available | Positive | 2243369 - 2243899 | 17998.7 |
| 50s ribosomal protein l3 | RT97_10400 | Not Available | Positive | 2244134 - 2244814 | 23659.4 |
| 50s ribosomal protein l4 | RT97_10405 | Not Available | Positive | 2244814 - 2245434 | 23053.9 |
| 50s ribosomal protein l23 | RT97_10410 | Not Available | Positive | 2245431 - 2245766 | 12062.8 |
| 50s ribosomal protein l2 | RT97_10415 | Not Available | Positive | 2245769 - 2246593 | 29992.3 |
| 30s ribosomal protein s19 | RT97_10420 | Not Available | Positive | 2246604 - 2246882 | 10400.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
