Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase | RT97_10225 | Not Available | Positive | 2201848 - 2202450 | 21555.0 |
| hypothetical protein | RT97_10230 | Not Available | Positive | 2202687 - 2203844 | 40194.0 |
| peptide chain release factor 3 | RT97_10235 | Not Available | Positive | 2204652 - 2206280 | 60257.4 |
| hypothetical protein | RT97_10240 | Not Available | Positive | 2206540 - 2208597 | 71590.1 |
| abc transporter permease | RT97_10245 | Not Available | Negative | 2208617 - 2209420 | 28652.5 |
| abc transporter permease | RT97_10250 | Not Available | Negative | 2209426 - 2210268 | 29683.9 |
| abc transporter | RT97_10255 | Not Available | Negative | 2210268 - 2211263 | 36680.5 |
| had family hydrolase | RT97_10260 | Not Available | Positive | 2211358 - 2212203 | 30140.5 |
| mfs transporter | RT97_10265 | Not Available | Negative | 2212193 - 2213446 | 42634.6 |
| tetr family transcriptional regulator | RT97_10270 | Not Available | Positive | 2213535 - 2214110 | 20574.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
