Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| competence protein comj | RT97_10175 | Not Available | Positive | 2193047 - 2194006 | 34301.2 |
| lipoprotein | RT97_10180 | Not Available | Negative | 2194024 - 2194650 | 21452.7 |
| 5,10-methylenetetrahydrofolate reductase | RT97_10185 | Not Available | Negative | 2194734 - 2195558 | 29793.7 |
| hemolysin | RT97_10190 | Not Available | Negative | 2195569 - 2196357 | 28010.3 |
| s-adenosyl-l-homocysteine hydrolase | RT97_10195 | Not Available | Negative | 2196365 - 2197804 | 52102.4 |
| hypothetical protein | RT97_10200 | Not Available | Positive | 2198068 - 2198706 | 22013.8 |
| phasin | RT97_10205 | Not Available | Positive | 2198880 - 2199383 | 18109.7 |
| alpha/beta hydrolase | RT97_10210 | Not Available | Positive | 2199397 - 2200314 | 32866.1 |
| hypothetical protein | RT97_10215 | Not Available | Positive | 2200344 - 2200781 | 15911.0 |
| poly-beta-hydroxybutyrate polymerase | RT97_10220 | Not Available | Positive | 2200778 - 2201851 | 40289.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
