Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation diffusion facilitator family transporter | RT97_10120 | Not Available | Negative | 2183173 - 2184093 | 33118.5 |
| hypothetical protein | RT97_10125 | Not Available | Positive | 2184243 - 2184734 | 16786.4 |
| flagellar motor protein motb | RT97_10130 | Not Available | Positive | 2184734 - 2185351 | 21973.1 |
| tyrosine--trna ligase | RT97_10135 | Not Available | Negative | 2185390 - 2186622 | 45146.0 |
| peptidase m23 | RT97_10140 | Not Available | Positive | 2186782 - 2188128 | 47705.1 |
| anhydro-n-acetylmuramic acid kinase | RT97_10145 | Not Available | Positive | 2188171 - 2189295 | 38861.3 |
| emrb/qaca subfamily drug resistance transporter | RT97_10150 | Not Available | Negative | 2189298 - 2190731 | 49969.7 |
| iron--sulfur cluster insertion protein erpa | RT97_10155 | Not Available | Negative | 2190822 - 2191187 | 12937.1 |
| 30s ribosomal protein s9 | RT97_10160 | Not Available | Negative | 2191371 - 2191763 | 14318.3 |
| 50s ribosomal protein l13 | RT97_10165 | Not Available | Negative | 2191776 - 2192207 | 15723.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
