Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine protein phosphatase | RT97_00900 | Not Available | Positive | 184270 - 185079 | 28812.7 |
| hypothetical protein | RT97_00905 | Not Available | Negative | 185101 - 185484 | 14247.0 |
| hypothetical protein | RT97_00910 | Not Available | Negative | 185530 - 186192 | 23664.6 |
| hypothetical protein | RT97_00915 | Not Available | Negative | 186252 - 187301 | 39079.5 |
| hypothetical protein | RT97_00920 | Not Available | Negative | 187298 - 189841 | 93999.7 |
| hypothetical protein | RT97_00925 | Not Available | Negative | 189838 - 190305 | 16657.7 |
| atpase aaa | RT97_00935 | Not Available | Negative | 192720 - 195449 | 98483.0 |
| hypothetical protein | RT97_00940 | Not Available | Negative | 195446 - 196642 | 44389.6 |
| type vi secretion system protein impg | RT97_00945 | Not Available | Negative | 196639 - 198510 | 69476.8 |
| hypothetical protein | RT97_00950 | Not Available | Negative | 198638 - 199165 | 19755.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
