Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | RT97_10020 | Not Available | Negative | 2169148 - 2170125 | 33479.8 |
| epimerase | RT97_10025 | Not Available | Negative | 2170202 - 2170864 | 23906.4 |
| thioredoxin | RT97_10030 | Not Available | Negative | 2170880 - 2171281 | 14172.8 |
| membrane protein | RT97_10035 | Not Available | Positive | 2171391 - 2171729 | 12813.6 |
| membrane protein | RT97_10040 | Not Available | Negative | 2171736 - 2172947 | 44319.1 |
| membrane protein | RT97_10045 | Not Available | Positive | 2173055 - 2173468 | 15129.0 |
| 2-hydroxyacid dehydrogenase | RT97_10050 | Not Available | Positive | 2173465 - 2174901 | 51038.0 |
| nitrile hydratase | RT97_10055 | Not Available | Negative | 2175030 - 2175398 | 13277.5 |
| nitrile hydratase | RT97_10060 | Not Available | Negative | 2175395 - 2176060 | 24084.4 |
| nitrile hydratase | RT97_10065 | Not Available | Negative | 2176057 - 2176713 | 24004.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
