Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_09970 | Not Available | Positive | 2160064 - 2160702 | 24371.3 |
| 4,5-dioxygenase | RT97_09975 | Not Available | Positive | 2160710 - 2161057 | 13122.6 |
| glutathione s-transferase | RT97_09980 | Not Available | Negative | 2161054 - 2161710 | 24051.4 |
| poly(3-hydroxybutyrate) depolymerase | RT97_09985 | Not Available | Positive | 2161793 - 2163010 | 45570.9 |
| lysr family transcriptional regulator | RT97_09990 | Not Available | Negative | 2163243 - 2164205 | 35251.0 |
| adenosine deaminase | RT97_09995 | Not Available | Positive | 2164238 - 2165392 | 43109.6 |
| abc transporter substrate-binding protein | RT97_10000 | Not Available | Positive | 2165401 - 2166378 | 33958.5 |
| cbs domain-containing protein | RT97_10005 | Not Available | Negative | 2166404 - 2166859 | 16814.6 |
| o-acetylhomoserine aminocarboxypropyltransferase | RT97_10010 | Not Available | Positive | 2167012 - 2168322 | 46387.2 |
| alpha/beta hydrolase | RT97_10015 | Not Available | Positive | 2168324 - 2169139 | 28714.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
