Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_09920 | Not Available | Negative | 2148159 - 2148599 | 14578.7 |
| tetr family transcriptional regulator | RT97_09925 | Not Available | Negative | 2148596 - 2149357 | 27718.2 |
| rnd transporter | RT97_09930 | Not Available | Positive | 2149605 - 2152835 | 114457.0 |
| rnd transporter mfp subunit | RT97_09935 | Not Available | Positive | 2152928 - 2154181 | 44409.4 |
| rnd transporter | RT97_09940 | Not Available | Positive | 2154178 - 2155623 | 51047.6 |
| radical sam protein | RT97_09945 | Not Available | Negative | 2155655 - 2156761 | 41117.4 |
| marr family transcriptional regulator | RT97_09950 | Not Available | Positive | 2156881 - 2157474 | 22316.8 |
| thiol-disulfide oxidoreductase | RT97_09955 | Not Available | Positive | 2157534 - 2157965 | 14909.2 |
| methyltransferase type 11 | RT97_09960 | Not Available | Positive | 2158024 - 2158974 | 34567.1 |
| polyketide cyclase | RT97_09965 | Not Available | Positive | 2159018 - 2160067 | 38865.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
