Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | RT97_09870 | Not Available | Positive | 2140184 - 2140609 | 15859.2 |
| 3'-5' exonuclease | RT97_09875 | Not Available | Positive | 2140606 - 2141217 | 22463.7 |
| salicylate esterase | RT97_09880 | Not Available | Negative | 2141242 - 2141970 | 26547.7 |
| arsr family transcriptional regulator | RT97_09885 | Not Available | Positive | 2142114 - 2142440 | 11423.9 |
| arsenical pump membrane protein | RT97_09890 | Not Available | Positive | 2142460 - 2143752 | 44835.4 |
| arsenate reductase | RT97_09895 | Not Available | Positive | 2143749 - 2144180 | 15920.3 |
| nadph-dependent fmn reductase | RT97_09900 | Not Available | Positive | 2144164 - 2144886 | 27010.7 |
| arac family transcriptional regulator | RT97_09905 | Not Available | Negative | 2144904 - 2145875 | 35227.1 |
| 6-phosphogluconate dehydrogenase | RT97_09910 | Not Available | Positive | 2146013 - 2147434 | 51746.2 |
| gcn5 family acetyltransferase | RT97_09915 | Not Available | Positive | 2147588 - 2148151 | 20838.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
