Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate dehydratase | RT97_09820 | Not Available | Negative | 2133207 - 2133647 | 15754.2 |
| (2fe-2s)-binding protein | RT97_09825 | Not Available | Positive | 2133719 - 2134402 | 24079.4 |
| (2fe-2s)-binding protein | RT97_09830 | Not Available | Positive | 2134412 - 2135275 | 31909.8 |
| glutathione s-transferase | RT97_09835 | Not Available | Positive | 2135272 - 2135922 | 23486.0 |
| alcohol dehydrogenase | RT97_09840 | Not Available | Positive | 2135983 - 2137089 | 39535.9 |
| alpha/beta hydrolase | RT97_09845 | Not Available | Positive | 2137109 - 2138029 | 33624.9 |
| s-formylglutathione hydrolase | RT97_09850 | Not Available | Positive | 2138026 - 2138904 | 31592.5 |
| gcn5 family acetyltransferase | RT97_09855 | Not Available | Positive | 2138932 - 2139435 | 19118.9 |
| glyoxalase | RT97_09860 | Not Available | Positive | 2139461 - 2139850 | 13780.2 |
| hypothetical protein | RT97_09865 | Not Available | Positive | 2139870 - 2140187 | 11464.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
