Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | RT97_09770 | Not Available | Positive | 2120582 - 2121574 | 34116.3 |
| phosphatidylserine decarboxylase | RT97_09775 | Not Available | Positive | 2121684 - 2122535 | 31103.5 |
| transcriptional regulator | RT97_09780 | Not Available | Positive | 2122715 - 2123131 | 14470.3 |
| peptidylprolyl isomerase | RT97_09785 | Not Available | Positive | 2123210 - 2123560 | 12211.3 |
| molecular chaperone grpe | RT97_09790 | Not Available | Positive | 2123753 - 2124283 | 18838.2 |
| molecular chaperone dnak | RT97_09795 | Not Available | Positive | 2124392 - 2126329 | 69241.4 |
| molecular chaperone dnaj | RT97_09800 | Not Available | Positive | 2126438 - 2127577 | 40967.4 |
| serine/threonine protein kinase | RT97_09805 | Not Available | Positive | 2128311 - 2130233 | 73321.3 |
| hypothetical protein | RT97_09810 | Not Available | Positive | 2130283 - 2131575 | 49186.6 |
| spovr family protein | RT97_09815 | Not Available | Positive | 2131637 - 2133190 | 60278.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
