Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | RT97_09720 | Not Available | Negative | 2110300 - 2111166 | 30688.4 |
| nad-dependent dehydratase | RT97_09725 | Not Available | Positive | 2111313 - 2112146 | 30343.0 |
| gluconolactonase | RT97_09730 | Not Available | Positive | 2112136 - 2113032 | 31689.5 |
| c4-dicarboxylate abc transporter | RT97_09735 | Not Available | Positive | 2113081 - 2114058 | 36067.7 |
| c4-dicarboxylate abc transporter permease | RT97_09740 | Not Available | Positive | 2114203 - 2114691 | 18090.6 |
| membrane protein | RT97_09745 | Not Available | Positive | 2114699 - 2115994 | 45147.1 |
| galactarate dehydrogenase | RT97_09750 | Not Available | Positive | 2116025 - 2117611 | 56180.4 |
| oxidoreductase | RT97_09755 | Not Available | Positive | 2117631 - 2118392 | 26600.9 |
| abc transporter substrate-binding protein | RT97_09760 | Not Available | Positive | 2118463 - 2119446 | 34590.9 |
| 6-phosphogluconolactonase | RT97_09765 | Not Available | Positive | 2119457 - 2120521 | 37453.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
