Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | RT97_09620 | Not Available | Negative | 2087078 - 2087851 | 27701.5 |
| rieske (2fe-2s) protein | RT97_09625 | Not Available | Negative | 2087848 - 2088957 | 41481.2 |
| methionine synthase | RT97_09630 | Not Available | Positive | 2089105 - 2090226 | 41853.0 |
| glutathione s-transferase | RT97_09635 | Not Available | Positive | 2090254 - 2090928 | 25149.4 |
| phospholipase | RT97_09640 | Not Available | Positive | 2090964 - 2092343 | 50826.4 |
| tetr family transcriptional regulator | RT97_09645 | Not Available | Negative | 2092321 - 2093019 | 25481.3 |
| membrane protein | RT97_09650 | Not Available | Positive | 2093120 - 2094133 | 36312.5 |
| abc transporter atp-binding protein | RT97_09655 | Not Available | Positive | 2094133 - 2095923 | 64566.9 |
| membrane protein | RT97_09660 | Not Available | Positive | 2095920 - 2097056 | 40995.4 |
| antibiotic abc transporter permease | RT97_09665 | Not Available | Positive | 2097070 - 2098188 | 40540.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
