Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-lactamase | RT97_09570 | Not Available | Positive | 2077192 - 2078109 | 32497.2 |
| protein-disulfide isomerase | RT97_09575 | Not Available | Positive | 2078097 - 2078828 | 25733.5 |
| antibiotic biosynthesis monooxygenase | RT97_09580 | Not Available | Negative | 2078825 - 2079109 | 10609.7 |
| feruloyl esterase | RT97_09585 | Not Available | Negative | 2079267 - 2080967 | 59634.9 |
| abc transporter atp-binding protein | RT97_09590 | Not Available | Negative | 2081000 - 2081704 | 25190.7 |
| hemolysin iii | RT97_09595 | Not Available | Negative | 2081697 - 2082470 | 27774.9 |
| abc transporter permease | RT97_09600 | Not Available | Negative | 2082467 - 2083459 | 35379.4 |
| abc transporter permease | RT97_09605 | Not Available | Negative | 2083581 - 2084453 | 30848.2 |
| abc transporter substrate-binding protein | RT97_09610 | Not Available | Negative | 2084644 - 2085828 | 42177.1 |
| diguanylate cyclase | RT97_09615 | Not Available | Negative | 2086058 - 2087044 | 34931.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
