Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | RT97_09420 | Not Available | Negative | 2042429 - 2042995 | 21165.8 |
| excinuclease abc subunit c | RT97_09425 | Not Available | Negative | 2043056 - 2045038 | 72847.4 |
| gamma-glutamyltransferase | RT97_09430 | Not Available | Positive | 2045182 - 2047254 | 70706.0 |
| peptidase m20 | RT97_09435 | Not Available | Negative | 2047293 - 2048744 | 52530.0 |
| hypothetical protein | RT97_09440 | Not Available | Positive | 2048832 - 2049938 | 40748.3 |
| elongation factor p | RT97_09445 | Not Available | Positive | 2050114 - 2050668 | 20670.8 |
| 3-isopropylmalate dehydrogenase | RT97_09450 | Not Available | Positive | 2050878 - 2051741 | 32111.4 |
| transcriptional regulator | RT97_09455 | Not Available | Negative | 2051865 - 2052509 | 23815.3 |
| mfs transporter | RT97_09460 | Not Available | Negative | 2052619 - 2053782 | 40667.1 |
| recombinase rmuc | RT97_09465 | Not Available | Negative | 2053779 - 2055149 | 50510.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
