Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | RT97_09370 | Not Available | Positive | 2034447 - 2034695 | 8441.7 |
| hypothetical protein | RT97_09375 | Not Available | Positive | 2034745 - 2035077 | 12812.4 |
| phosphoglycerate kinase | RT97_09380 | Not Available | Negative | 2035105 - 2035779 | 24940.6 |
| peptidylprolyl isomerase | RT97_09385 | Not Available | Negative | 2035881 - 2037797 | 69514.3 |
| Trna-val | Not Available | Not Available | Positive | 2037875 - 2037950 | Not Available |
| transcriptional regulator hu subunit alpha | RT97_09395 | Not Available | Negative | 2037977 - 2038249 | 9458.64 |
| tartrate dehydrogenase | RT97_09400 | Not Available | Negative | 2038484 - 2039569 | 39545.4 |
| alpha/beta hydrolase | RT97_09405 | Not Available | Negative | 2039566 - 2040498 | 33724.3 |
| lysr family transcriptional regulator | RT97_09410 | Not Available | Positive | 2040570 - 2041529 | 35191.5 |
| peptide abc transporter atp-binding protein | RT97_09415 | Not Available | Negative | 2041536 - 2042432 | 31224.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
