Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | RT97_09270 | Not Available | Positive | 2015984 - 2016778 | 28095.3 |
| thiamine biosynthesis protein apbe | RT97_09275 | Not Available | Positive | 2016794 - 2017798 | 35555.9 |
| oxidoreductase | RT97_09280 | Not Available | Positive | 2017795 - 2019153 | 48614.5 |
| catecholate siderophore receptor fiu | RT97_09285 | Not Available | Positive | 2019389 - 2021767 | 84686.1 |
| fe(ii)-dependent oxygenase | RT97_09290 | Not Available | Positive | 2021855 - 2022535 | 25326.2 |
| energy transducer tonb | RT97_09295 | Not Available | Positive | 2023022 - 2023723 | 24786.0 |
| biopolymer transporter | RT97_09300 | Not Available | Positive | 2023736 - 2024452 | 25432.9 |
| biopolymer transporter exbd | RT97_09305 | Not Available | Positive | 2024458 - 2024871 | 15335.4 |
| hemin transporter hemp | RT97_09310 | Not Available | Positive | 2024969 - 2025181 | 7398.07 |
| hypothetical protein | RT97_09315 | Not Available | Negative | 2025363 - 2025770 | 13754.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
