Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asnc family transcriptional regulator | RT97_09220 | Not Available | Negative | 2009023 - 2009475 | 16812.5 |
| multidrug dmt transporter permease | RT97_09225 | Not Available | Positive | 2009587 - 2010483 | 31159.2 |
| hypothetical protein | RT97_09230 | Not Available | Negative | 2010488 - 2010769 | 10231.2 |
| dna-binding protein | RT97_09235 | Not Available | Negative | 2011005 - 2011550 | 19492.4 |
| membrane protein | RT97_09240 | Not Available | Negative | 2011572 - 2011965 | 13566.0 |
| alkyl hydroperoxide reductase | RT97_09245 | Not Available | Negative | 2011966 - 2013206 | 44648.6 |
| alkyl hydroperoxide reductase | RT97_09250 | Not Available | Negative | 2013297 - 2013860 | 20627.5 |
| bacterioferritin | RT97_09255 | Not Available | Positive | 2014112 - 2014588 | 18168.7 |
| membrane protein | RT97_09260 | Not Available | Positive | 2014707 - 2015351 | 23988.0 |
| hypothetical protein | RT97_09265 | Not Available | Positive | 2015384 - 2015917 | 19359.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
