Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyanate hydratase | RT97_09060 | Not Available | Positive | 1983158 - 1983601 | 16599.0 |
| oxidoreductase | RT97_09065 | Not Available | Negative | 1983639 - 1984388 | 26563.9 |
| hypothetical protein | RT97_09070 | Not Available | Positive | 1984850 - 1985173 | 11820.8 |
| hypothetical protein | RT97_09075 | Not Available | Negative | 1985181 - 1985600 | 15274.3 |
| glutaredoxin | RT97_09080 | Not Available | Negative | 1985700 - 1986065 | 13385.4 |
| hypothetical protein | RT97_09085 | Not Available | Negative | 1986145 - 1986441 | 11086.7 |
| membrane protein | RT97_09090 | Not Available | Positive | 1986709 - 1987098 | 14207.0 |
| nucleoside 2-deoxyribosyltransferase | RT97_09095 | Not Available | Positive | 1987163 - 1987705 | 19118.9 |
| nadph-dependent fmn reductase | RT97_09100 | Not Available | Negative | 1987699 - 1988289 | 21560.8 |
| hypothetical protein | RT97_09105 | Not Available | Negative | 1988282 - 1988902 | 22408.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
