Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | RT97_09005 | Not Available | Positive | 1971635 - 1973005 | 49448.7 |
| hypothetical protein | RT97_09010 | Not Available | Positive | 1973037 - 1974020 | 34387.0 |
| methyltransferase | RT97_09020 | Not Available | Negative | 1975022 - 1975654 | 22982.3 |
| tetr family transcriptional regulator | RT97_09025 | Not Available | Positive | 1975763 - 1976389 | 22884.3 |
| alpha-ketoglutarate permease | RT97_09030 | Not Available | Negative | 1976401 - 1977735 | 48027.1 |
| lactate dehydrogenase | RT97_09035 | Not Available | Negative | 1977849 - 1979006 | 42007.9 |
| lysr family transcriptional regulator | RT97_09040 | Not Available | Negative | 1979174 - 1980058 | 32873.5 |
| lactate permease | RT97_09045 | Not Available | Positive | 1980205 - 1981866 | 58978.8 |
| tetr family transcriptional regulator | RT97_09050 | Not Available | Negative | 1981844 - 1982455 | 22000.5 |
| histidine kinase | RT97_09055 | Not Available | Positive | 1982542 - 1982964 | 16996.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
