Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_08700 | Not Available | Negative | 1904041 - 1905705 | 60049.6 |
| conjugal transfer protein trar | RT97_08705 | Not Available | Negative | 1905754 - 1906380 | 22978.4 |
| hypothetical protein | RT97_08710 | Not Available | Positive | 1907076 - 1908602 | 53388.9 |
| cobalamin biosynthesis protein cobw | RT97_08715 | Not Available | Negative | 1908732 - 1909784 | 39456.9 |
| 23s rrna methyltransferase | RT97_08720 | Not Available | Negative | 1909885 - 1911117 | 44467.0 |
| recombinase xerc | RT97_08725 | Not Available | Negative | 1911114 - 1912139 | 37576.9 |
| membrane protein | RT97_08730 | Not Available | Negative | 1912123 - 1912752 | 22189.0 |
| hypothetical protein | RT97_08735 | Not Available | Negative | 1912767 - 1913462 | 25775.6 |
| diaminopimelate epimerase | RT97_08740 | Not Available | Negative | 1913459 - 1914352 | 31972.1 |
| mfs transporter | RT97_08745 | Not Available | Negative | 1914416 - 1915996 | 55934.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
