Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoylalanine--d-glutamate ligase | RT97_08650 | Not Available | Negative | 1891879 - 1894107 | 77054.5 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | RT97_08655 | Not Available | Negative | 1894118 - 1895296 | 43516.4 |
| udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate--d-alanyl-d-alanine ligase | RT97_08660 | Not Available | Negative | 1895319 - 1896758 | 50500.2 |
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase | RT97_08665 | Not Available | Negative | 1896814 - 1898376 | 54023.2 |
| cell division protein | RT97_08670 | Not Available | Negative | 1898379 - 1900133 | 63801.9 |
| cell division protein ftsl | RT97_08675 | Not Available | Negative | 1900130 - 1900477 | 12958.9 |
| 16s rrna methyltransferase | RT97_08680 | Not Available | Negative | 1900479 - 1901402 | 33685.1 |
| cell division protein mraz | RT97_08685 | Not Available | Negative | 1901411 - 1901839 | 15866.1 |
| atp-dependent protease atp-binding subunit hslu | RT97_08690 | Not Available | Negative | 1902111 - 1903439 | 49028.8 |
| atp-dependent protease subunit hslv | RT97_08695 | Not Available | Negative | 1903442 - 1903987 | 19388.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
