Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidate cytidylyltransferase | RT97_08600 | Not Available | Positive | 1880507 - 1881496 | 36677.4 |
| holliday junction resolvase | RT97_08605 | Not Available | Positive | 1881661 - 1882209 | 18982.0 |
| udp-3-o-(3-hydroxymyristoyl) glucosamine n-acyltransferase | RT97_08610 | Not Available | Negative | 1882419 - 1883342 | 33882.4 |
| cell division protein ftsz | RT97_08615 | Not Available | Negative | 1883647 - 1884876 | 42282.4 |
| cell division protein ftsa | RT97_08620 | Not Available | Negative | 1885047 - 1886276 | 43603.2 |
| cell division protein ftsq | RT97_08625 | Not Available | Negative | 1886307 - 1887095 | 28789.5 |
| d-alanine--d-alanine ligase | RT97_08630 | Not Available | Negative | 1887098 - 1888069 | 34822.8 |
| udp-n-acetylmuramate--alanine ligase | RT97_08635 | Not Available | Negative | 1888066 - 1889523 | 50613.8 |
| udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-udp n-acetylglucosamine transferase | RT97_08640 | Not Available | Negative | 1889520 - 1890584 | 37623.9 |
| cell division protein ftsw | RT97_08645 | Not Available | Negative | 1890581 - 1891882 | 47089.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
