Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-ribosylglycohydrolase | RT97_08550 | Not Available | Negative | 1869773 - 1870927 | 41345.1 |
| histidine kinase | RT97_08555 | Not Available | Negative | 1870960 - 1872816 | 67544.7 |
| luxr family transcriptional regulator | RT97_08560 | Not Available | Negative | 1872823 - 1873566 | 26507.9 |
| esterase | RT97_08565 | Not Available | Positive | 1873933 - 1874526 | 22283.6 |
| ribonuclease ii | RT97_08570 | Not Available | Positive | 1874651 - 1876711 | 74389.4 |
| energy transducer tonb | RT97_08575 | Not Available | Positive | 1876761 - 1877612 | 31191.2 |
| shikimate dehydrogenase | RT97_08580 | Not Available | Positive | 1877636 - 1878493 | 29427.2 |
| peptidoglycan transglycosylase | RT97_08585 | Not Available | Positive | 1878498 - 1879241 | 27210.1 |
| hypothetical protein | RT97_08590 | Not Available | Negative | 1879186 - 1879629 | 16202.2 |
| glycerol acyltransferase | RT97_08595 | Not Available | Positive | 1879639 - 1880502 | 30827.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
