Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_00750 | Not Available | Negative | 147989 - 148390 | 14601.9 |
| hypothetical protein | RT97_00755 | Not Available | Positive | 148414 - 148701 | 10921.0 |
| mfs transporter | RT97_00760 | Not Available | Positive | 148698 - 150185 | 51850.0 |
| abc transporter substrate-binding protein | RT97_00765 | Not Available | Negative | 150218 - 151075 | 29596.4 |
| abc transporter permease | RT97_00770 | Not Available | Negative | 151068 - 151895 | 29633.1 |
| abc transporter atp-binding protein | RT97_00775 | Not Available | Negative | 152050 - 152859 | 30007.4 |
| myristoyl transferase | RT97_00780 | Not Available | Negative | 152872 - 153924 | 37662.9 |
| l-glyceraldehyde 3-phosphate reductase | RT97_00785 | Not Available | Positive | 154074 - 155114 | 38326.5 |
| serine/threonine protein kinase | RT97_00790 | Not Available | Positive | 155345 - 159385 | 146695.0 |
| hypothetical protein | RT97_00795 | Not Available | Positive | 159403 - 160191 | 28800.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
