Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein l11 methyltransferase | RT97_08500 | Not Available | Negative | 1860259 - 1861149 | 31713.8 |
| acetyl-coa carboxylase | RT97_08505 | Not Available | Negative | 1861166 - 1862515 | 49516.9 |
| acetyl-coa carboxylase | RT97_08510 | Not Available | Negative | 1862518 - 1862979 | 15615.7 |
| redoxin | RT97_08515 | Not Available | Negative | 1863080 - 1863634 | 19547.4 |
| hypothetical protein | RT97_08520 | Not Available | Negative | 1863635 - 1864231 | 22164.4 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | RT97_08525 | Not Available | Positive | 1864343 - 1865746 | 49667.5 |
| hypothetical protein | RT97_08530 | Not Available | Positive | 1865743 - 1866252 | 18697.2 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | RT97_08535 | Not Available | Negative | 1866269 - 1867387 | 40558.4 |
| hypothetical protein | RT97_08540 | Not Available | Negative | 1867616 - 1868152 | 18192.3 |
| protease tldd | RT97_08545 | Not Available | Negative | 1868199 - 1869659 | 51461.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
