Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acriflavine resistance protein b | RT97_08400 | Not Available | Negative | 1832723 - 1835887 | 113231.0 |
| rnd transporter | RT97_08405 | Not Available | Negative | 1835949 - 1837124 | 40400.0 |
| hypothetical protein | RT97_08410 | Not Available | Positive | 1837380 - 1837835 | 16460.7 |
| (dimethylallyl)adenosine trna methylthiotransferase | RT97_08415 | Not Available | Positive | 1837919 - 1839286 | 50545.8 |
| histidine kinase | RT97_08420 | Not Available | Positive | 1839286 - 1840713 | 52489.6 |
| hypothetical protein | RT97_08425 | Not Available | Positive | 1840775 - 1841443 | 23478.2 |
| response regulator glrr | RT97_08430 | Not Available | Positive | 1841440 - 1842828 | 50216.5 |
| glucosyl transferase family 2 | RT97_08435 | Not Available | Positive | 1843231 - 1845255 | 73847.9 |
| hypothetical protein | RT97_08440 | Not Available | Positive | 1845316 - 1845612 | 11521.8 |
| signal recognition particle | RT97_08445 | Not Available | Negative | 1845679 - 1847076 | 49851.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
