Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | RT97_08345 | Not Available | Positive | 1820440 - 1821276 | 29559.5 |
| nad-dependent dehydratase | RT97_08350 | Not Available | Negative | 1821317 - 1822213 | 31592.8 |
| xre family transcriptional regulator | RT97_08355 | Not Available | Positive | 1822314 - 1823135 | 30308.4 |
| hypothetical protein | RT97_08365 | Not Available | Negative | 1827047 - 1828159 | 40448.0 |
| short-chain dehydrogenase | RT97_08370 | Not Available | Positive | 1828195 - 1828971 | 27664.1 |
| dihydroneopterin aldolase | RT97_08375 | Not Available | Positive | 1828980 - 1829372 | 14509.8 |
| potassium abc transporter atpase | RT97_08380 | Not Available | Positive | 1829425 - 1830366 | 35076.5 |
| hypothetical protein | RT97_08385 | Not Available | Positive | 1830413 - 1831051 | 22856.8 |
| phosphoglycerate mutase | RT97_08390 | Not Available | Positive | 1831095 - 1831739 | 23726.0 |
| hypothetical protein | RT97_08395 | Not Available | Positive | 1831793 - 1832479 | 24666.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
